Table 1 Annotation of the predicted vmiRNA sequences
miRNA ID and Sequencea | Orientation | Positionsb | Locus |
BBrMV miRNA 1 | Forward | 1807 to 1888 | HcPro |
Sequence | GGUAUCAGUCGUAUGAGUUACGAGUAUCUCCAAAUUGUACUAGGAAACUAGCAAUUGGAAGAUUGUUGGUCUCAACGAAUAU | ||
BBrMV miRNA 2 | Forward | 3672 to 3763 | 6 K1-CI |
Sequence | GUGGGGUUUCAGAAUUUAGAUGAGAUACAAGAUAUUGAAGCAGAGAAGAAGACAACAAUUGAUUUCAUCUUAGCUGAUGAUACACCACTCGC | ||
BBrMV miRNA 3 | Forward | 204 to 285 | P1 protein |
Sequence | UCGCCAACGAGUGUUAAGAUGACAGUCGCACCACAAUGCAUGGCGGCACUAGAGGUGGAAUGUGAUACAACACUUAAGGCGG | ||
BBrMV miRNA 4 | Forward | 4192 to 4264 | CI |
Sequence | UCAUAAUCCUUGAUGAAUGUCAUGUUAUGGAUGCUUCAGCAAUGGCGUUCUAUUGUCUACUCAAGGAGUAUGC | ||
BBrMV miRNA 5 | Forward | 6710 to 6808 | NIa |
Sequence | AGGUGGGUGUUUUUGGAAGCAUUGGAUUGAUACGAAGAAAGGUGAUUGUGGUUUACCUAUGGUUUCAACAAAAGAUGGCUUCAUUUUAGGCAUCCAUAG | ||
BBrMV miRNA 6 | Reverse | 294–194 | P1 |
Sequence | CUGGCGUCGCCGCCUUAAGUGUUGUAUCACAUUCCACCUCUAGUGCCGCCAUGCAUUGUGGUGCGACUGUCAUCUUAACACUCGUUGGCGAUGCUGGCUCU | ||
BBrMV miRNA 7 | Reverse | 5225 to 5318 | CI |
Sequence | AAGUGUGCGGGGAAUUGCAAACGAAUCGCAACUGAGAGUGUAUGCAAUUGAGCAUGCACUCGCUGUUGUGAGUCGUCCAAACCCAGCAUCAGUU | ||